STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69246.1KEGG: mar:MAE_07260 hypothetical protein. (101 aa)    
Predicted Functional Partners:
ACK69247.1
KEGG: mar:MAE_07250 hypothetical protein.
     0.991
ACK70061.1
PFAM: GUN4 domain protein; KEGG: npu:Npun_F2466 GUN4 domain-containing protein.
  
     0.773
ACK73313.1
PFAM: GUN4 domain protein; KEGG: mar:MAE_25410 hypothetical protein.
  
     0.770
ACK70218.1
PFAM: protein of unknown function DUF1230; KEGG: mar:MAE_05550 hypothetical protein.
  
     0.767
ACK69295.1
Ferredoxin-like protein; KEGG: mar:MAE_52160 ferredoxin.
  
     0.766
ACK71432.1
PFAM: protein of unknown function YGGT; KEGG: npu:Npun_F5950 protein of unknown function YGGT.
  
     0.764
psaE
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.759
ACK72979.1
PFAM: GUN4 domain protein; KEGG: npu:Npun_F2466 GUN4 domain-containing protein.
  
     0.755
ACK73106.1
KEGG: ter:Tery_4494 hypothetical protein.
  
     0.755
ACK69137.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.753
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.