STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69260.1PFAM: tail sheath protein; KEGG: gvi:glr4100 similar to bacteriophage major tail sheath protein. (551 aa)    
Predicted Functional Partners:
ACK69586.1
PFAM: GPW/gp25 family protein; KEGG: gvi:gll1413 hypothetical protein.
 
   0.980
ACK70161.1
PFAM: GPW/gp25 family protein; KEGG: amr:AM1_6406 gpW / GP25 family protein.
 
   0.980
ACK69587.1
KEGG: gvi:gll1412 hypothetical protein.
 
 
 0.955
ACK70160.1
KEGG: gvi:gll1412 hypothetical protein.
 
 
 0.955
ACK70066.1
KEGG: amr:AM1_5910 hypothetical protein.
 
 
 0.952
ACK70180.1
TIGRFAM: phage tail protein; KEGG: amr:AM1_6404 hypothetical protein.
 
 
 0.952
ACK69589.1
TIGRFAM: phage tail protein; KEGG: gvi:gll1411 hypothetical protein.
 
 
 0.944
ACK70179.1
KEGG: amr:AM1_5910 hypothetical protein.
 
 
 0.940
ACK69258.1
TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: npu:Npun_F1114 phage tail protein.
 
 
 0.933
ACK69259.1
TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: gvi:glr4101 hypothetical protein.
 
     0.915
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.