STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69273.1PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mar:MAE_33070 membrane-associated rubredoxin; Belongs to the rubredoxin family. (115 aa)    
Predicted Functional Partners:
ACK70249.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ter:Tery_3369 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
 0.784
ACK68946.1
PFAM: beta-lactamase domain protein; flavin reductase domain protein FMN-binding; flavodoxin/nitric oxide synthase; KEGG: npu:Npun_R0591 flavin reductase domain-containing protein.
 
  
 0.744
ACK69901.1
PFAM: beta-lactamase domain protein; flavin reductase domain protein FMN-binding; flavodoxin/nitric oxide synthase; KEGG: mar:MAE_61610 flavoprotein.
 
  
 0.739
ACK69272.1
Putative photosystem II protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
 
   
 0.737
ACK68944.1
PFAM: beta-lactamase domain protein; flavin reductase domain protein FMN-binding; KEGG: ava:Ava_1371 flavin reductase-like, FMN-binding.
 
  
 0.719
ACK71369.1
PFAM: beta-lactamase domain protein; flavin reductase domain protein FMN-binding; KEGG: syp:SYNPCC7002_A1321 flavoprotein.
 
  
 0.708
ACK69708.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.675
ACK72993.1
PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: aba:Acid345_2736 rubrerythrin.
 
  
 0.644
ACK69274.1
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: mar:MAE_24610 2-octaprenyl-6-methoxyphenol hydroxylase.
       0.592
psbF
Cytochrome b559, beta subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.
     
 0.561
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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