STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69296.1PFAM: YiaAB two helix domain protein; KEGG: npu:Npun_F0110 YiaAB two helix domain-containing protein. (93 aa)    
Predicted Functional Partners:
ACK73633.1
Conserved hypothetical protein; KEGG: ana:all5246 unknown protein.
  
     0.536
ACK73598.1
PFAM: GCN5-related N-acetyltransferase; KEGG: npu:Npun_F1179 GCN5-related N-acetyltransferase.
  
     0.473
ACK71812.1
PFAM: protein of unknown function DUF58; KEGG: mar:MAE_53050 hypothetical protein.
  
     0.408
ACK68479.1
KEGG: amr:AM1_4133 eight transmembrane protein EpsH, putative.
  
     0.401
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.