STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69328.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: npu:Npun_F2805 ABC transporter related. (316 aa)    
Predicted Functional Partners:
ACK69327.1
KEGG: mar:MAE_45760 hypothetical protein.
 
  
 0.881
ACK72754.1
PFAM: ABC-2 type transporter; KEGG: syn:slr0347 putative ABC-2 type transport system permease protein.
  
 
 0.649
ACK73648.1
KEGG: mar:MAE_12720 type IV pilus biogenesis protein PilI homolog.
  
 
 0.649
ACK68482.1
KEGG: ana:alr3649 heterocyst specific ABC-transporter, ATP-binding subunit DevA homolog; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; PFAM: ABC transporter related; SMART: AAA ATPase.
   
0.580
ACK69997.1
KEGG: mar:MAE_56350 hypothetical protein.
  
     0.571
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
  
 
 0.544
ACK73230.1
PFAM: ABC-2 type transporter; KEGG: mar:MAE_21960 ABC-2 type transport system permease protein.
  
  
 0.537
ACK70197.1
Putative signal transduction protein with Nacht domain protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: Armadillo domain protein; AAA ATPase; KEGG: ana:all3892 hypothetical protein.
  
    0.498
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.498
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.465
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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