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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69415.1KEGG: npu:Npun_F1025 hypothetical protein. (777 aa)    
Predicted Functional Partners:
ACK69096.1
PFAM: transport-associated; KEGG: ava:Ava_0596 transport-associated protein.
  
     0.684
ACK73289.1
PFAM: transport-associated; KEGG: mar:MAE_29250 hypothetical protein.
  
     0.678
ACK69150.1
KEGG: cyb:CYB_2724 hypothetical protein.
  
     0.618
ACK70189.1
Conserved hypothetical protein; KEGG: ana:alr1180 unknown protein.
  
     0.597
ACK70427.1
PFAM: Hemolysin-type calcium-binding region; Polymorphic membrane protein Chlamydia; KEGG: mar:MAE_01000 hypothetical protein.
  
  
 0.563
ACK71761.1
KEGG: npu:Npun_F5453 hypothetical protein.
  
     0.562
ACK69416.1
PFAM: protein of unknown function DUF820; KEGG: mar:MAE_07110 hypothetical protein.
       0.495
ACK71981.1
PFAM: 5'-Nucleotidase domain protein; KEGG: syf:Synpcc7942_1392 alkaline phosphatase.
  
  
 0.488
ACK69432.1
Transposase-like Mu; PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: npu:Npun_R5674 integrase catalytic subunit.
  
     0.483
ACK71392.1
Conserved hypothetical protein; KEGG: ana:all4767 unknown protein.
  
     0.461
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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