STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69453.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
ACK69454.1
PFAM: regulatory protein MerR; Resolvase domain; KEGG: kcr:Kcr_1386 DNA binding domain protein, excisionase family.
       0.773
ACK69455.1
TIGRFAM: transposase, IS607 family; PFAM: transposase IS605 OrfB; KEGG: mar:MAE_45770 transposase.
       0.705
ACK69451.1
PFAM: protein of unknown function DUF86; KEGG: lch:Lcho_0358 protein of unknown function DUF86.
       0.426
ACK69452.1
PFAM: DNA polymerase beta domain protein region; KEGG: ter:Tery_0898 DNA polymerase, beta-like region.
       0.426
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.