STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69522.1KEGG: ava:Ava_0870 hypothetical protein. (1052 aa)    
Predicted Functional Partners:
ACK73108.1
PFAM: metallophosphoesterase; KEGG: gvi:glr2510 hypothetical protein.
 
 0.965
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.910
ACK71431.1
PFAM: metallophosphoesterase; KEGG: mar:MAE_14860 putative transcripton factor for heterocyst differentiation.
 
 0.885
sbcD
Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
 0.869
ACK71761.1
KEGG: npu:Npun_F5453 hypothetical protein.
  
    0.776
ACK71762.1
PFAM: PRC-barrel domain protein; conserved hypothetical protein; KEGG: ana:all4050 akinete-marker protein, AnAKa.
  
    0.776
ACK72855.1
PFAM: conserved hypothetical protein; KEGG: ana:all5315 AnAKb, homolog of akinete-marker protein.
  
    0.776
ACK70367.1
Conserved hypothetical protein; KEGG: ana:alr3577 unknown protein.
  
     0.756
ACK71594.1
KEGG: ava:Ava_2429 hypothetical protein.
  
     0.753
ACK71553.1
KEGG: ava:Ava_4895 hypothetical protein.
  
     0.737
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.