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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69562.1PFAM: inner-membrane translocator; KEGG: mar:MAE_02170 amino acid transport system permease protein. (290 aa)    
Predicted Functional Partners:
ACK73240.1
PFAM: inner-membrane translocator; KEGG: syn:sll0146 ABC-type neutral amino acid transport system permease protein.
 
0.990
ACK73241.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syn:slr0467 ABC-type neutral amino acid transport system ATP-binding protein.
 
 
 0.990
ACK69324.1
PFAM: Extracellular ligand-binding receptor; KEGG: mar:MAE_32490 periplasmic binding protein.
 
 
 0.978
ACK71537.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_01200 amino acid transport ATP-binding protein.
 
 
 0.975
ACK71269.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mar:MAE_06200 UreA transport system permease protein.
  
 0.933
ACK71271.1
KEGG: npu:Npun_F4623 UreA ABC transporter, ATPase subunit UrtE; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.853
ACK71270.1
KEGG: mar:MAE_06190 UreA transport system ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.806
ACK69753.1
PFAM: Extracellular ligand-binding receptor; KEGG: ana:alr4531 putative branched-chain amino acid transport system substrate-binding protein.
 
  
 0.782
ACK71267.1
TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: mar:MAE_06220 ABC-type UreA transport system substrate-binding protein.
 
  
 0.761
ACK73320.1
PFAM: Extracellular ligand-binding receptor; KEGG: ana:alr4531 putative branched-chain amino acid transport system substrate-binding protein.
 
  
 0.651
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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