STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69570.1KEGG: mar:MAE_39850 hypothetical protein. (76 aa)    
Predicted Functional Partners:
ACK72936.1
KEGG: syn:ssr1562 hypothetical protein.
  
     0.762
ACK71795.1
KEGG: mar:MAE_39690 hypothetical protein.
  
     0.756
ACK71794.1
KEGG: ava:Ava_2666 hypothetical protein.
  
     0.753
ACK69658.1
KEGG: syn:ssr1256 hypothetical protein.
  
     0.740
ACK68834.1
KEGG: mar:MAE_24280 hypothetical protein.
  
     0.717
ACK69215.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: npu:Npun_F5449 peptidase C14, caspase catalytic subunit P20.
  
     0.687
ACK70202.1
KEGG: mar:MAE_41320 hypothetical protein.
  
     0.645
ACK68632.1
KEGG: mar:MAE_41110 hypothetical protein.
  
     0.633
ACK69728.1
PFAM: von Willebrand factor type A; KEGG: mar:MAE_06250 hypothetical protein.
  
     0.620
ACK68952.1
PFAM: TspO/MBR family protein; KEGG: ava:Ava_0788 TspO and MBR related proteins.
  
     0.612
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.