STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69588.1KEGG: mar:MAE_37330 hypothetical protein. (124 aa)    
Predicted Functional Partners:
ACK71398.1
PFAM: S23 ribosomal protein; KEGG: pca:Pcar_1793 hypothetical protein.
  
     0.634
ACK68507.1
PFAM: S23 ribosomal protein; KEGG: ana:alr8017 hypothetical protein.
  
     0.627
ACK69586.1
PFAM: GPW/gp25 family protein; KEGG: gvi:gll1413 hypothetical protein.
       0.584
ACK69587.1
KEGG: gvi:gll1412 hypothetical protein.
       0.584
ACK73165.1
KEGG: chu:CHU_0701 hypothetical protein.
  
     0.560
ACK69878.1
KEGG: rba:RB3569 hypothetical protein.
  
     0.534
ACK69589.1
TIGRFAM: phage tail protein; KEGG: gvi:gll1411 hypothetical protein.
       0.485
ACK70904.1
PFAM: S23 ribosomal protein; KEGG: npu:Npun_BF200 S23 ribosomal protein.
  
     0.456
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.