STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69648.1PFAM: protein of unknown function DUF202; KEGG: syn:sll0847 hypothetical protein. (137 aa)    
Predicted Functional Partners:
ACK69650.1
PFAM: Bile acid:sodium symporter; protein of unknown function DUF202; KEGG: rci:RCIX67 putative Na(+)-dependent symporter.
      
0.777
ACK69649.1
PFAM: protein of unknown function DUF202; KEGG: syn:sll0847 hypothetical protein.
      
0.768
ACK69651.1
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bcs:BCAN_A1658 hypothetical protein.
       0.731
ACK69652.1
PFAM: sulfatase; KEGG: mac:MA2648 arylsulfatase.
       0.432
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.