Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACK68627.1 | ACK69512.1 | PCC7424_0157 | PCC7424_1058 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | KEGG: ava:Ava_1924 hypothetical protein. | 0.735 |
ACK68627.1 | ACK69629.1 | PCC7424_0157 | PCC7424_1178 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | KEGG: ana:all3173 hypothetical protein. | 0.628 |
ACK68627.1 | ACK69732.1 | PCC7424_0157 | PCC7424_1285 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | KEGG: syn:ssl1911 glutamine synthetase inactivating factor IF7. | 0.628 |
ACK68627.1 | ACK71702.1 | PCC7424_0157 | PCC7424_3303 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | KEGG: syn:ssr0657 hypothetical protein. | 0.738 |
ACK68627.1 | ACK71818.1 | PCC7424_0157 | PCC7424_3423 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | KEGG: syn:slr1353 hypothetical protein. | 0.449 |
ACK68627.1 | ACK71939.1 | PCC7424_0157 | PCC7424_3549 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | KEGG: npu:Npun_F4003 hypothetical protein. | 0.734 |
ACK68627.1 | psbY | PCC7424_0157 | PCC7424_2342 | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | Photosystem II protein PsbY; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family. | 0.477 |
ACK69512.1 | ACK68627.1 | PCC7424_1058 | PCC7424_0157 | KEGG: ava:Ava_1924 hypothetical protein. | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | 0.735 |
ACK69512.1 | ACK69629.1 | PCC7424_1058 | PCC7424_1178 | KEGG: ava:Ava_1924 hypothetical protein. | KEGG: ana:all3173 hypothetical protein. | 0.581 |
ACK69512.1 | ACK69732.1 | PCC7424_1058 | PCC7424_1285 | KEGG: ava:Ava_1924 hypothetical protein. | KEGG: syn:ssl1911 glutamine synthetase inactivating factor IF7. | 0.647 |
ACK69512.1 | ACK71470.1 | PCC7424_1058 | PCC7424_3068 | KEGG: ava:Ava_1924 hypothetical protein. | KEGG: npu:Npun_R5762 hypothetical protein. | 0.453 |
ACK69512.1 | ACK71702.1 | PCC7424_1058 | PCC7424_3303 | KEGG: ava:Ava_1924 hypothetical protein. | KEGG: syn:ssr0657 hypothetical protein. | 0.706 |
ACK69629.1 | ACK68627.1 | PCC7424_1178 | PCC7424_0157 | KEGG: ana:all3173 hypothetical protein. | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | 0.628 |
ACK69629.1 | ACK69512.1 | PCC7424_1178 | PCC7424_1058 | KEGG: ana:all3173 hypothetical protein. | KEGG: ava:Ava_1924 hypothetical protein. | 0.581 |
ACK69629.1 | ACK69732.1 | PCC7424_1178 | PCC7424_1285 | KEGG: ana:all3173 hypothetical protein. | KEGG: syn:ssl1911 glutamine synthetase inactivating factor IF7. | 0.651 |
ACK69629.1 | ACK71470.1 | PCC7424_1178 | PCC7424_3068 | KEGG: ana:all3173 hypothetical protein. | KEGG: npu:Npun_R5762 hypothetical protein. | 0.765 |
ACK69629.1 | ACK71702.1 | PCC7424_1178 | PCC7424_3303 | KEGG: ana:all3173 hypothetical protein. | KEGG: syn:ssr0657 hypothetical protein. | 0.411 |
ACK69629.1 | ACK71727.1 | PCC7424_1178 | PCC7424_3328 | KEGG: ana:all3173 hypothetical protein. | KEGG: mar:MAE_07290 hypothetical protein. | 0.727 |
ACK69732.1 | ACK68627.1 | PCC7424_1285 | PCC7424_0157 | KEGG: syn:ssl1911 glutamine synthetase inactivating factor IF7. | PFAM: CpcD phycobilisome linker domain protein; KEGG: npu:Npun_R2751 oxidoreductase FAD/NAD(P)-binding subunit. | 0.628 |
ACK69732.1 | ACK69512.1 | PCC7424_1285 | PCC7424_1058 | KEGG: syn:ssl1911 glutamine synthetase inactivating factor IF7. | KEGG: ava:Ava_1924 hypothetical protein. | 0.647 |
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