STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69760.1PFAM: protein of unknown function DUF421; KEGG: mma:MM_3260 hypothetical protein. (184 aa)    
Predicted Functional Partners:
ACK69759.1
PFAM: Ion transport 2 domain protein; KEGG: bsu:BSU06220 hypothetical protein.
 
     0.922
ACK68652.1
PFAM: protein of unknown function DUF326; KEGG: rpi:Rpic_1744 protein of unknown function DUF326.
  
     0.533
ACK71692.1
Catalase; PFAM: manganese containing catalase; KEGG: msm:MSMEG_6213 manganese containing catalase.
  
   
 0.501
ACK71242.1
Catalase; PFAM: manganese containing catalase; KEGG: ana:alr0998 putative catalase.
  
   
 0.492
ACK69513.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: npu:Npun_F3466 short-chain dehydrogenase/reductase SDR.
  
     0.484
ACK72343.1
PFAM: protein of unknown function DUF1206; KEGG: npu:Npun_R6105 hypothetical protein.
  
     0.476
ACK69754.1
PFAM: zinc/iron permease; KEGG: noc:Noc_1342 peptidoglycan-binding LysM.
  
     0.424
ACK69758.1
PFAM: beta-lactamase; KEGG: mac:MA1345 FmtA-like protein.
       0.418
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.