STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbLRibulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (472 aa)    
Predicted Functional Partners:
ACK69809.1
PFAM: ribulose bisphosphate carboxylase small chain; KEGG: mar:MAE_47870 ribulose bisphosphate carboxylase small subunit.
 
 0.998
ACK69813.1
Carbonate dehydratase; PFAM: ribulose bisphosphate carboxylase small chain; transferase hexapeptide repeat containing protein; KEGG: mar:MAE_47910 carbon dioxide concentrating mechanism protein.
  
 
 0.973
ACK73549.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: mar:MAE_38450 phosphoribulokinase.
 
  
 0.949
pgk
PFAM: phosphoglycerate kinase; KEGG: mar:MAE_43670 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.913
ACK69810.1
PFAM: chaperonin family protein RbcX; KEGG: mar:MAE_47880 possible RubisCO chaperonin.
   
 
 0.906
ACK71872.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: syp:SYNPCC7002_A2154 putative haloacid dehalogenase-like hydrolase.
     
 0.903
ACK72406.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mar:MAE_50490 phosphoglycolate phosphatase.
     
 0.903
ACK68822.1
KEGG: ter:Tery_3799 glycerate kinase.
     
  0.900
ACK71161.1
KEGG: mar:MAE_08590 hypothetical protein.
    
   0.840
ACK68774.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: mar:MAE_51120 haloacid dehalogenase-like hydrolase.
  
  
 0.774
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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