STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK69838.1KEGG: syn:slr1926 hypothetical protein. (167 aa)    
Predicted Functional Partners:
psaE-2
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.757
psb28
TIGRFAM: photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; KEGG: mar:MAE_54390 photosystem II reaction center 13 kDa protein; Belongs to the Psb28 family.
  
     0.755
ACK69351.1
KEGG: mar:MAE_04030 hypothetical protein.
  
     0.751
ACK70104.1
KEGG: mar:MAE_06290 hypothetical protein.
  
     0.751
ACK71432.1
PFAM: protein of unknown function YGGT; KEGG: npu:Npun_F5950 protein of unknown function YGGT.
 
     0.751
psaE
Photosystem I reaction centre subunit IV/PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.749
ACK73106.1
KEGG: ter:Tery_4494 hypothetical protein.
  
     0.742
ACK69246.1
KEGG: mar:MAE_07260 hypothetical protein.
  
     0.733
ACK72916.1
PFAM: photosystem I protein PsaD; KEGG: mar:MAE_23300 photosystem I subunit II.
  
     0.731
ACK73285.1
PFAM: photosystem II manganese-stabilizing protein PsbO; KEGG: mar:MAE_44250 photosystem II manganese-stabilizing polypeptide.
  
     0.731
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.