STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70055.1TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; small GTP-binding protein domain; KEGG: mar:MAE_05440 small GTP-binding protein. (453 aa)    
Predicted Functional Partners:
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: syp:SYNPCC7002_A2853 NAD+ dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.746
panC/cmk
Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
  
 0.639
ACK70853.1
KEGG: amr:AM1_E0001 hypothetical protein.
   
    0.597
ACK72293.1
KEGG: amr:AM1_E0001 hypothetical protein.
   
    0.597
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
   
    0.597
ACK70056.1
Hypothetical protein.
       0.581
ACK71941.1
TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mar:MAE_23590 GTP-binding protein TypA/BipA homolog.
  
  
 0.577
ACK69417.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: mar:MAE_20050 hypothetical protein.
  
     0.576
ACK70277.1
KEGG: mar:MAE_25960 hypothetical protein.
  
     0.572
ACK69602.1
KEGG: ana:all4790 hypothetical protein.
  
     0.542
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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