STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70181.1KEGG: amr:AM1_6403 hypothetical protein. (455 aa)    
Predicted Functional Partners:
ACK70182.1
Putative sensor with HAMP domain; PFAM: histidine kinase HAMP region domain protein; KEGG: amr:AM1_0017 sensor histidine kinase, putative.
       0.718
ACK70180.1
TIGRFAM: phage tail protein; KEGG: amr:AM1_6404 hypothetical protein.
       0.642
ACK70183.1
PFAM: WD-40 repeat protein; KEGG: amr:AM1_6401 WD-repeat protein.
       0.572
ACK70184.1
KEGG: amr:AM1_6400 hypothetical protein.
       0.524
ACK70179.1
KEGG: amr:AM1_5910 hypothetical protein.
       0.502
ACK70178.1
TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: amr:AM1_5908 hypothetical protein.
       0.415
ACK70185.1
PFAM: pentapeptide repeat protein; KEGG: amr:AM1_5389 pentapeptide repeat protein.
       0.414
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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