STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70329.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amr:AM1_2961 sugar ABC transporter, permease protein. (291 aa)    
Predicted Functional Partners:
ACK70328.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amr:AM1_2960 sugar ABC transporter, permease protein.
 0.999
ACK73033.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amr:AM1_1478 sugar ABC transporter, ATP-binding protein.
 
 0.994
ACK70666.1
PFAM: extracellular solute-binding protein family 1; KEGG: amr:AM1_2958 sugar ABC transporter, solute-binding protein, putative.
 
 
 0.984
ACK68867.1
Thiamine pyridinylase; KEGG: cbh:CLC_0826 putative thiaminase I.
  
 
 0.929
ACK70330.1
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; BAAT/Acyl-CoA thioester hydrolase; KEGG: sru:SRU_1703 dienelactone hydrolase family.
       0.658
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.584
ACK72904.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ter:Tery_4205 oxidoreductase-like.
 
     0.524
ACK73276.1
TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PEP-utilizing protein; PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: npu:Npun_R1176 phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
 
   
 0.505
ACK71306.1
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: mar:MAE_58250 N-acetylglucosamine-6-phosphate deacetylase.
 
   
 0.454
ACK68734.1
PFAM: PfkB domain protein; KEGG: ana:alr0517 fructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.451
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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