STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70415.1KEGG: ana:alr2478 hypothetical protein. (108 aa)    
Predicted Functional Partners:
ACK71702.1
KEGG: syn:ssr0657 hypothetical protein.
  
     0.741
ACK72752.1
KEGG: ava:Ava_4233 hypothetical protein.
  
     0.735
ACK71396.1
PFAM: protein of unknown function DUF490; KEGG: ana:all0462 hypothetical protein.
  
     0.723
ACK69220.1
KEGG: syn:slr0975 hypothetical protein.
  
     0.719
ACK71853.1
KEGG: ava:Ava_1391 hypothetical protein.
  
     0.706
ACK70037.1
KEGG: syn:slr0779 hypothetical protein.
  
     0.701
ACK70553.1
KEGG: ter:Tery_4130 hypothetical protein.
  
     0.691
ACK69417.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: mar:MAE_20050 hypothetical protein.
  
     0.680
ACK72977.1
KEGG: mar:MAE_28340 hypothetical protein.
  
     0.674
ACK73533.1
KEGG: mar:MAE_53710 hypothetical protein.
  
     0.673
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.