STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70425.1KEGG: syp:SYNPCC7002_A0160 hypothetical protein. (160 aa)    
Predicted Functional Partners:
ACK72873.1
KEGG: mar:MAE_37870 hypothetical protein.
  
     0.766
ACK73285.1
PFAM: photosystem II manganese-stabilizing protein PsbO; KEGG: mar:MAE_44250 photosystem II manganese-stabilizing polypeptide.
  
    0.766
ACK71432.1
PFAM: protein of unknown function YGGT; KEGG: npu:Npun_F5950 protein of unknown function YGGT.
  
    0.763
ACK70203.1
KEGG: npu:Npun_F0133 hypothetical protein.
  
     0.762
ACK69351.1
KEGG: mar:MAE_04030 hypothetical protein.
  
     0.756
ACK70718.1
KEGG: mar:MAE_50780 hypothetical protein.
  
     0.756
ACK72916.1
PFAM: photosystem I protein PsaD; KEGG: mar:MAE_23300 photosystem I subunit II.
  
     0.756
ACK73106.1
KEGG: ter:Tery_4494 hypothetical protein.
  
     0.752
ACK72318.1
KEGG: ava:Ava_0555 hypothetical protein.
  
     0.750
psb28
TIGRFAM: photosystem II reaction center protein Psb28; PFAM: photosystem II protein PsbW class I; KEGG: mar:MAE_54390 photosystem II reaction center 13 kDa protein; Belongs to the Psb28 family.
  
     0.748
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.