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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70427.1PFAM: Hemolysin-type calcium-binding region; Polymorphic membrane protein Chlamydia; KEGG: mar:MAE_01000 hypothetical protein. (786 aa)    
Predicted Functional Partners:
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
  
 
 0.865
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
    
 
 0.801
ACK71980.1
PFAM: Hemolysin-type calcium-binding region; KEGG: ter:Tery_2593 periplasmic protein TonB links inner and outer membranes-like.
  
     0.667
ACK71706.1
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mar:MAE_02780 smf family DNA processing protein.
  
    0.658
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
   
 
 0.601
ACK73295.1
PFAM: protein of unknown function DUF839; KEGG: mar:MAE_30190 hypothetical protein.
 
  
 0.581
ACK69415.1
KEGG: npu:Npun_F1025 hypothetical protein.
  
  
 0.563
ACK70604.1
KEGG: npu:Npun_R3764 alkaline phosphatase.
  
  
 0.563
ACK73602.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ana:alr4238 similar to phytase.
 
   
 0.560
ACK71528.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: syn:slr1102 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.557
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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