STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70428.1PFAM: Hemolysin-type calcium-binding region; Polymorphic membrane protein Chlamydia; KEGG: rba:RB4375 extracellular nuclease. (817 aa)    
Predicted Functional Partners:
ACK71980.1
PFAM: Hemolysin-type calcium-binding region; KEGG: ter:Tery_2593 periplasmic protein TonB links inner and outer membranes-like.
  
     0.643
ACK70429.1
PFAM: Proprotein convertase P; KEGG: mar:MAE_12430 hypothetical protein.
 
     0.580
ACK68705.1
KEGG: mca:MCA1422 hypothetical protein.
  
   0.478
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
     
 0.440
ACK71968.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; KEGG: mar:MAE_54550 ABC-transporter ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
 
  
 0.413
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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