STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70435.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2. (512 aa)    
Predicted Functional Partners:
ACK70840.1
PFAM: Heat shock protein 70; KEGG: fal:FRAAL2972 hypothetical protein; putative ricin B lectin and actin-like ATPase domains.
 
 0.960
ACK70841.1
Heat shock protein 70; PFAM: Tetratricopeptide TPR_2 repeat protein; Heat shock protein 70; SMART: Tetratricopeptide domain protein; KEGG: aau:AAur_3285 putative DnaK family protein.
 
 0.959
ACK70848.1
Hypothetical protein; KEGG: fra:Francci3_0322 WD-40 repeat-containing protein.
  
 0.949
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.841
ACK70605.1
PFAM: Mov34/MPN/PAD-1 family protein; KEGG: npu:Npun_F2019 Mov34/MPN/PAD-1 family protein.
   
  0.775
ACK68894.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ana:all4659 hypothetical protein.
 
     0.768
ACK71040.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: syn:slr1956 hypothetical protein.
  
 
  0.768
ACK69867.1
KEGG: ter:Tery_4979 WD-40 repeat-containing protein.
   
 
0.729
ACK70083.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: ter:Tery_4979 WD-40 repeat-containing protein.
 
 
 
0.729
ACK70578.1
PFAM: Ankyrin; KEGG: mar:MAE_44620 ankyrin repeat domain-containing protein 50.
  
 0.707
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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