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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70436.1KEGG: ter:Tery_0176 hypothetical protein. (183 aa)    
Predicted Functional Partners:
ACK71568.1
KEGG: ter:Tery_4365 hypothetical protein.
  
     0.640
ACK72925.1
PFAM: monooxygenase FAD-binding; KEGG: npu:Npun_R6036 monooxygenase, FAD-binding.
  
     0.585
ACK70291.1
Hypothetical protein; KEGG: swd:Swoo_0853 ATPase.
  
     0.573
ACK70793.1
PFAM: protein of unknown function DUF262; KEGG: ter:Tery_0134 hypothetical protein.
  
     0.546
ACK68889.1
KEGG: npu:Npun_R3390 hypothetical protein.
  
     0.542
ACK68978.1
KEGG: hmo:HM1_0513 hypothetical protein.
  
     0.539
ACK72171.1
PFAM: DoxX family protein; KEGG: cya:CYA_2476 DoxX family protein.
  
     0.522
ACK73074.1
KEGG: ter:Tery_5018 hypothetical protein.
  
     0.481
ACK70792.1
KEGG: ter:Tery_0136 hypothetical protein.
  
     0.478
ACK69458.1
KEGG: ana:asr1667 unknown protein.
  
     0.471
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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