STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70442.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: syn:slr0678 putative biopolymer transport ExbD protein. (219 aa)    
Predicted Functional Partners:
ACK70441.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mar:MAE_08540 MotA/TolQ/ExbB proton channel family protein.
 
 
 0.986
ACK70812.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: syn:sll1404 biopolymer transport ExbB protein 3.
 
 
 0.951
ACK68807.1
TIGRFAM: TonB family protein; KEGG: mar:MAE_59390 hypothetical protein.
 
 
 0.894
ACK70811.1
TIGRFAM: TonB family protein; KEGG: syn:slr1484 hypothetical protein.
 
 
 0.889
ACK72472.1
KEGG: tel:tll1125 unknown protein.
  
 
 0.821
ACK71639.1
KEGG: ava:Ava_4816 hypothetical protein.
  
 
 0.730
ACK72973.1
KEGG: ava:Ava_4816 hypothetical protein.
  
 
 0.730
ACK71439.1
PFAM: Mammalian cell entry related domain protein; KEGG: mar:MAE_05890 hypothetical protein.
  
 
   0.565
ACK71259.1
PFAM: Lytic transglycosylase catalytic; KEGG: mar:MAE_31350 lytic transglycosylase catalytic precursor.
 
  
 0.544
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.542
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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