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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70444.1KEGG: mar:MAE_10300 periplasmic polyamine-binding protein. (384 aa)    
Predicted Functional Partners:
ACK71994.1
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ter:Tery_2817 binding-protein-dependent transport systems inner membrane component.
  
 0.954
ACK71993.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ter:Tery_2818 binding-protein-dependent transport systems inner membrane component.
 
  
 0.953
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.930
ACK69725.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mar:MAE_12460 iron(III)-transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.815
ACK70443.1
KEGG: mar:MAE_08560 hypothetical protein.
       0.534
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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