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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70448.1KEGG: npu:Npun_R4524 hypothetical protein. (89 aa)    
Predicted Functional Partners:
ACK71784.1
TIGRFAM: rod shape-determining protein MreD; KEGG: ava:Ava_1459 hypothetical protein.
  
     0.770
ACK69392.1
PFAM: protein of unknown function DUF1400; KEGG: npu:Npun_R1020 hypothetical protein.
  
     0.661
ACK73495.1
KEGG: npu:Npun_F4150 hypothetical protein.
  
     0.631
ACK68904.1
KEGG: npu:Npun_R1856 hypothetical protein.
  
     0.621
ACK72183.1
KEGG: npu:Npun_R4177 hypothetical protein.
  
     0.620
ACK69909.1
KEGG: mar:MAE_58970 hypothetical protein.
  
     0.613
ACK69798.1
PFAM: Mo-dependent nitrogenase family protein; KEGG: ava:Ava_3610 Mo-dependent nitrogenase-like.
  
     0.612
ACK69435.1
KEGG: mar:MAE_60980 hypothetical protein.
  
     0.607
ACK71662.1
KEGG: mar:MAE_32250 hypothetical protein.
  
     0.598
ACK72384.1
KEGG: syp:SYNPCC7002_A1075 hypothetical protein.
  
     0.586
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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