STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70507.1KEGG: ava:Ava_1979 hypothetical protein. (295 aa)    
Predicted Functional Partners:
ACK70508.1
KEGG: mar:MAE_45790 hypothetical protein.
 
     0.942
ACK70782.1
KEGG: syp:SYNPCC7002_A2419 hypothetical protein.
  
     0.702
ACK70553.1
KEGG: ter:Tery_4130 hypothetical protein.
  
     0.693
ACK73223.1
PFAM: Ycf66 family protein; KEGG: syp:SYNPCC7002_A0516 hypothetical protein.
  
     0.687
ACK71479.1
KEGG: ter:Tery_4264 toll-interleukin receptor.
  
 
   0.639
ACK71461.1
PFAM: CHASE2 domain protein; KEGG: ter:Tery_0228 putative CHASE2 sensor protein.
  
     0.621
ACK69417.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: mar:MAE_20050 hypothetical protein.
  
     0.617
ACK72849.1
KEGG: mar:MAE_18630 hypothetical protein.
  
     0.615
ACK69953.1
TIR protein; KEGG: npu:Npun_R0838 TIR protein.
  
 
   0.607
ACK71031.1
KEGG: syp:SYNPCC7002_A0378 hypothetical protein.
  
     0.587
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.