STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70562.1KEGG: amr:AM1_5795 hypothetical protein. (260 aa)    
Predicted Functional Partners:
ACK70948.1
KEGG: ter:Tery_2153 hypothetical protein.
  
     0.644
ACK72209.1
Chromosome segregation ATPase-like protein; KEGG: syn:slr1567 hypothetical protein.
  
     0.561
ACK71959.1
KEGG: amr:AM1_5798 radical SAM domain protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.526
ACK73211.1
PFAM: GUN4 domain protein; KEGG: mar:MAE_35780 hypothetical protein.
  
     0.513
ACK70563.1
KEGG: amr:AM1_5797 hypothetical protein.
 
     0.511
ACK69615.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: npu:Npun_F4014 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.441
ACK70092.1
PFAM: glycoside hydrolase family 24; KEGG: ava:Ava_4318 glycoside hydrolase family protein.
  
     0.438
ACK69625.1
KEGG: ava:Ava_5041 hypothetical protein.
  
     0.435
ACK69090.1
KEGG: mar:MAE_15980 hypothetical protein.
  
     0.432
ACK69942.1
PFAM: S-layer domain protein; Carbohydrate-selective porin OprB; KEGG: mar:MAE_06090 porin type major outer membrane protein; Belongs to the OprB family.
  
     0.402
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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