STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70572.1KEGG: gvi:gsl0042 hypothetical protein. (70 aa)    
Predicted Functional Partners:
ACK69582.1
KEGG: amr:AM1_5531 hypothetical protein.
  
     0.577
ACK70573.1
PFAM: protein of unknown function DUF214; KEGG: amr:AM1_1602 ABC transporter, permease protein.
       0.528
ACK70574.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amr:AM1_1601 ABC transporter ATP-binding protein.
       0.491
ACK73174.1
KEGG: ava:Ava_0421 hypothetical protein.
  
     0.430
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.