STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70680.1PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: mar:MAE_18510 muramoyltetrapeptide carboxypeptidase. (363 aa)    
Predicted Functional Partners:
ACK72700.1
KEGG: npu:Npun_R1733 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C.
 
   
 0.563
ACK70679.1
TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ngo:NGO0365 site-specific DNA-methyltransferase M.NgoVII.
       0.545
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
   
 0.514
ACK70300.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mar:MAE_09770 putative beta-glucosidase.
  
   
 0.502
ACK70803.1
PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: mar:MAE_53230 D-alanyl-D-alanine carboxypeptidase.
 
   
 0.406
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.