STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70686.1PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mar:MAE_04090 pilus biogenesis protein. (769 aa)    
Predicted Functional Partners:
ACK72554.1
PFAM: type II secretion system protein; KEGG: mar:MAE_04110 pilin biogenesis protein.
 
 
 0.974
ACK73021.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.885
ACK71687.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: mar:MAE_09710 type IV pilus assembly protein.
 
 
 
 0.884
ACK68728.1
KEGG: mar:MAE_46550 pilin polypeptide.
 
 
 0.877
ACK73382.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mar:MAE_15780 twitching mobility protein.
  
 0.812
ACK71686.1
PFAM: Fimbrial assembly family protein; KEGG: mar:MAE_09720 type IV pilus assembly protein.
  
 
 0.764
ACK68731.1
KEGG: mar:MAE_46550 pilin polypeptide.
 
 
 0.762
ACK71684.1
PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: mar:MAE_09740 type IV pilus assembly protein.
 
 
 
 0.699
ACK70032.1
PFAM: ComEC/Rec2-related protein; KEGG: mar:MAE_58670 competence protein.
  
  
 0.623
ACK73617.1
KEGG: syp:SYNPCC7002_A2335 general secretory pathway proteins G and H.
 
 
 0.601
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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