STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70726.1KEGG: msi:Msm_0212 hypothetical protein. (394 aa)    
Predicted Functional Partners:
ACK73012.1
PFAM: YcfA family protein; KEGG: syf:Synpcc7942_0870 hypothetical protein.
 
 
 
 0.505
ACK69304.1
PFAM: YcfA family protein; KEGG: rrs:RoseRS_1788 hypothetical protein.
   
 
 0.434
ACK71081.1
PFAM: YcfA family protein; KEGG: mar:MAE_44030 YcfA family protein.
   
 
 0.434
ACK71614.1
PFAM: YcfA family protein; KEGG: npu:Npun_F3501 YcfA family protein.
   
 
 0.434
ACK70727.1
KEGG: mar:MAE_06580 hypothetical protein.
       0.424
ACK70936.1
KEGG: amr:AM1_1925 hypothetical protein.
  
     0.421
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.