STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70959.1KEGG: ava:Ava_B0155 hypothetical protein. (70 aa)    
Predicted Functional Partners:
ACK69518.1
PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein ShlB-type; KEGG: syn:slr1661 putative hemolysin activation/secretion protein.
  
     0.568
ACK70298.1
KEGG: cyb:CYB_1240 hypothetical protein.
  
     0.551
ACK70296.1
Hypothetical protein; KEGG: tel:tlr0680 type 4 prepilin-like protein.
  
     0.534
ACK70667.1
PFAM: ferredoxin thioredoxin reductase alpha chain; KEGG: npu:Npun_R0618 ferredoxin thioredoxin reductase, alpha chain.
  
     0.533
ACK71967.1
KEGG: mar:MAE_54540 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.524
ACK72867.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: npu:Npun_F4181 surface antigen (D15).
  
     0.511
ACK70297.1
KEGG: ava:Ava_0265 hypothetical protein.
  
     0.498
ACK73225.1
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: ana:alr2785 bifunctional lycopene cyclase/dioxygenase.
  
     0.462
ACK73286.1
KEGG: syn:slr0443 hypothetical protein.
  
     0.451
ACK69552.1
TIGRFAM: CO2 hydration protein; PFAM: CO2 hydration family protein; KEGG: mar:MAE_15160 CO2-hydration protein.
  
     0.441
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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