STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK70999.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_35550 ABC-transporter ATP-binding protein. (259 aa)    
Predicted Functional Partners:
ACK71405.1
PFAM: protein of unknown function DUF140; KEGG: mar:MAE_12060 hypothetical protein; Belongs to the MlaE permease family.
 0.994
ACK72932.1
PFAM: protein of unknown function DUF140; KEGG: mar:MAE_32280 hypothetical protein; Belongs to the MlaE permease family.
 0.994
ACK72933.1
PFAM: Mammalian cell entry related domain protein; KEGG: mar:MAE_35560 hypothetical protein.
 
 0.976
ACK71439.1
PFAM: Mammalian cell entry related domain protein; KEGG: mar:MAE_05890 hypothetical protein.
 
 0.973
ACK71438.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syp:SYNPCC7002_A2721 ATP-binding protein of ABC transporter.
  
  
 
0.902
ACK71022.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: syn:slr1227 chloroplast import-associated channel IAP75.
 
   
 0.578
rpsE
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
     0.570
ACK70505.1
KEGG: mar:MAE_26050 anti-sigma-factor antagonist and sugar transfersase; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sugar transferase.
   
   0.559
ACK72940.1
Anti-sigma-factor antagonist and sugar transfersase; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sugar transferase; KEGG: ana:all4160 probable glycosyltransferase.
   
   0.559
ACK68855.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mar:MAE_45630 anti-sigma-factor antagonist.
   
   0.545
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.