STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71327.1KEGG: syn:slr1726 hypothetical protein. (242 aa)    
Predicted Functional Partners:
ACK71328.1
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: cya:CYA_1048 pterin-4-alpha-carbinolamine dehydratase.
       0.773
ACK68503.1
PFAM: lipolytic protein G-D-S-L family; KEGG: syp:SYNPCC7002_A0972 GDSL-like lipase/acylhydrolase domain-containing protein.
  
     0.749
ACK72379.1
KEGG: mar:MAE_37770 hypothetical protein.
  
     0.719
ACK72832.1
KEGG: mar:MAE_18920 hypothetical protein.
  
     0.626
ACK71329.1
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand-containing protein; KEGG: mar:MAE_23670 hypothetical protein.
 
     0.539
ACK68529.1
PFAM: cyclic nucleotide-binding; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mag:amb3535 sulfate permease and related transporters.
  
     0.516
ACK71853.1
KEGG: ava:Ava_1391 hypothetical protein.
  
     0.491
ACK70347.1
KEGG: mar:MAE_03850 hypothetical protein.
  
     0.485
ACK73060.1
KEGG: syn:slr1957 hypothetical protein.
  
     0.484
ACK70126.1
KEGG: syp:SYNPCC7002_A2166 hypothetical protein.
  
     0.479
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.