STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71385.1PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: atc:AGR_C_4286 hypothetical protein. (404 aa)    
Predicted Functional Partners:
ACK71383.1
PFAM: GH3 auxin-responsive promoter; KEGG: cac:CAC3411 plant auxin-responsive GH3-like protein.
  
     0.677
ACK69924.1
KEGG: ter:Tery_0192 hypothetical protein.
  
     0.528
ACK72541.1
PFAM: major facilitator superfamily MFS_1; KEGG: mar:MAE_53040 major facilitator superfamily protein.
  
     0.511
ACK70732.1
TIGRFAM: CRISPR-associated protein DevS; CRISPR-associated protein Cas5; KEGG: ava:Ava_3493 fruiting body developmental protein S-like protein.
  
     0.482
ACK71387.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: gvi:glr2450 hypothetical protein.
  
     0.479
ACK73338.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: ter:Tery_2968 amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.466
ACK69280.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ana:all1695 probable peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.462
ACK71381.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: ana:all3866 probable dioxygenase, Rieske iron-sulfur component.
  
     0.438
ACK70733.1
TIGRFAM: CRISPR-associated regulatory protein, DevR family; KEGG: ava:Ava_3492 CRISPR-associated negative autoregulator.
  
     0.424
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
     
 0.421
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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