STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71405.1PFAM: protein of unknown function DUF140; KEGG: mar:MAE_12060 hypothetical protein; Belongs to the MlaE permease family. (264 aa)    
Predicted Functional Partners:
ACK70999.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_35550 ABC-transporter ATP-binding protein.
 0.994
ACK71438.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syp:SYNPCC7002_A2721 ATP-binding protein of ABC transporter.
 0.994
ACK71439.1
PFAM: Mammalian cell entry related domain protein; KEGG: mar:MAE_05890 hypothetical protein.
 
 0.985
ACK72933.1
PFAM: Mammalian cell entry related domain protein; KEGG: mar:MAE_35560 hypothetical protein.
 
 0.982
ACK72932.1
PFAM: protein of unknown function DUF140; KEGG: mar:MAE_32280 hypothetical protein; Belongs to the MlaE permease family.
  
  
 
0.902
ACK71022.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: syn:slr1227 chloroplast import-associated channel IAP75.
 
     0.743
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.689
ACK72132.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_51260 ABC-transporter ATP-binding protein.
 
  
  0.683
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
     0.660
ACK72133.1
PFAM: permease YjgP/YjgQ family protein; KEGG: mar:MAE_51250 hypothetical protein.
  
   
 0.639
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.