STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71413.1FHA modulated glycosyl transferase/transpeptidase; KEGG: mar:MAE_48130 penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Forkhead-associated protein; glycosyl transferase family 51; penicillin-binding protein transpeptidase. (750 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.811
ACK70423.1
KEGG: npu:Npun_R3949 hypothetical protein.
   
 
 0.800
ACK71427.1
PFAM: cell cycle protein; KEGG: mar:MAE_16870 cell division protein; Belongs to the SEDS family.
 
 
 
 0.745
ACK68872.1
KEGG: npu:Npun_R3817 hypothetical protein.
 
 
 
 0.738
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 
 
 0.699
ACK71259.1
PFAM: Lytic transglycosylase catalytic; KEGG: mar:MAE_31350 lytic transglycosylase catalytic precursor.
 
  
 0.689
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.681
ACK70285.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mar:MAE_05460 penicillin-binding protein.
 
 
 
0.681
ACK71301.1
KEGG: mar:MAE_21260 penicillin-binding protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 
0.666
ACK69027.1
PFAM: Peptidase M23; KEGG: mar:MAE_13410 probable peptidase.
 
   
 0.652
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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