STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71470.1KEGG: npu:Npun_R5762 hypothetical protein. (86 aa)    
Predicted Functional Partners:
ACK71469.1
KEGG: mar:MAE_07360 hypothetical protein.
       0.773
ACK69629.1
KEGG: ana:all3173 hypothetical protein.
  
     0.765
ACK68729.1
KEGG: mar:MAE_46520 hypothetical protein.
  
     0.746
ACK69957.1
KEGG: syn:sll1736 hypothetical protein.
  
     0.744
ACK72987.1
PFAM: S-layer domain protein; KEGG: mar:MAE_31270 S-layer region-like precursor.
  
     0.740
ACK71727.1
KEGG: mar:MAE_07290 hypothetical protein.
  
     0.729
ACK68974.1
PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; SMART: Tetratricopeptide domain protein; KEGG: mar:MAE_41210 heat shock protein DnaJ-like.
  
     0.713
ACK68537.1
KEGG: mar:MAE_01990 hypothetical protein.
  
     0.704
ACK73607.1
PFAM: Mo-dependent nitrogenase family protein; KEGG: mar:MAE_18160 Mo-dependent nitrogenase-like.
  
     0.700
ACK70802.1
PFAM: Domain of unknown function DUF1817; KEGG: ana:all5169 hypothetical protein.
  
   
 0.698
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.