STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71473.1KEGG: mar:MAE_18100 hypothetical protein. (83 aa)    
Predicted Functional Partners:
ACK68998.1
KEGG: mar:MAE_10070 hypothetical protein.
  
     0.748
ACK72987.1
PFAM: S-layer domain protein; KEGG: mar:MAE_31270 S-layer region-like precursor.
  
     0.740
ACK70802.1
PFAM: Domain of unknown function DUF1817; KEGG: ana:all5169 hypothetical protein.
  
     0.724
ndhN
NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.724
ACK71478.1
KEGG: ter:Tery_1164 hypothetical protein.
  
     0.711
ACK68518.1
KEGG: mar:MAE_28100 hypothetical protein.
  
     0.699
ACK72590.1
PFAM: glutaredoxin 2; KEGG: syn:ssr1391 hypothetical protein.
  
     0.695
ACK70077.1
PFAM: Abortive infection protein; KEGG: mar:MAE_52440 abortive infection protein like.
  
     0.691
ACK71744.1
KEGG: mar:MAE_45990 hypothetical protein.
  
     0.682
ACK69810.1
PFAM: chaperonin family protein RbcX; KEGG: mar:MAE_47880 possible RubisCO chaperonin.
  
     0.673
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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