Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACK71505.1 | ACK71506.1 | PCC7424_3103 | PCC7424_3104 | Hypothetical protein; KEGG: amr:AM1_2093 transposase, putative. | Hypothetical protein. | 0.570 |
ACK71505.1 | ACK71507.1 | PCC7424_3103 | PCC7424_3105 | Hypothetical protein; KEGG: amr:AM1_2093 transposase, putative. | PFAM: ThiJ/PfpI domain protein; KEGG: ana:all7521 ThiJ family protein. | 0.510 |
ACK71506.1 | ACK71505.1 | PCC7424_3104 | PCC7424_3103 | Hypothetical protein. | Hypothetical protein; KEGG: amr:AM1_2093 transposase, putative. | 0.570 |
ACK71506.1 | ACK71507.1 | PCC7424_3104 | PCC7424_3105 | Hypothetical protein. | PFAM: ThiJ/PfpI domain protein; KEGG: ana:all7521 ThiJ family protein. | 0.578 |
ACK71506.1 | ACK71508.1 | PCC7424_3104 | PCC7424_3106 | Hypothetical protein. | GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; GAF domain protein; KEGG: syf:Synpcc7942_B2644 response regulator receiver domain-containing protein. | 0.421 |
ACK71507.1 | ACK71505.1 | PCC7424_3105 | PCC7424_3103 | PFAM: ThiJ/PfpI domain protein; KEGG: ana:all7521 ThiJ family protein. | Hypothetical protein; KEGG: amr:AM1_2093 transposase, putative. | 0.510 |
ACK71507.1 | ACK71506.1 | PCC7424_3105 | PCC7424_3104 | PFAM: ThiJ/PfpI domain protein; KEGG: ana:all7521 ThiJ family protein. | Hypothetical protein. | 0.578 |
ACK71507.1 | ACK71508.1 | PCC7424_3105 | PCC7424_3106 | PFAM: ThiJ/PfpI domain protein; KEGG: ana:all7521 ThiJ family protein. | GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; GAF domain protein; KEGG: syf:Synpcc7942_B2644 response regulator receiver domain-containing protein. | 0.553 |
ACK71508.1 | ACK71506.1 | PCC7424_3106 | PCC7424_3104 | GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; GAF domain protein; KEGG: syf:Synpcc7942_B2644 response regulator receiver domain-containing protein. | Hypothetical protein. | 0.421 |
ACK71508.1 | ACK71507.1 | PCC7424_3106 | PCC7424_3105 | GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; GAF domain protein; KEGG: syf:Synpcc7942_B2644 response regulator receiver domain-containing protein. | PFAM: ThiJ/PfpI domain protein; KEGG: ana:all7521 ThiJ family protein. | 0.553 |