STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71656.1Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: amr:AM1_5302 hypothetical protein. (438 aa)    
Predicted Functional Partners:
ACK72452.1
KEGG: mar:MAE_53810 hypothetical protein.
  
     0.575
ACK71655.1
PFAM: Forkhead-associated protein; KEGG: mar:MAE_25310 FHA domain containing protein.
   
   0.552
ACK69228.1
KEGG: npu:Npun_R3590 TPR repeat-containing protein.
  
 
  0.535
ACK73609.1
KEGG: ana:asr1134 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
     0.530
ACK71645.1
PFAM: WD-40 repeat protein; SMART: TIR protein; KEGG: npu:Npun_F1222 WD-40 repeat-containing protein.
 
     0.527
ACK72196.1
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: gvi:gll1406 FraH protein homolog.
  
 
   0.522
ACK72850.1
PFAM: CsbD family protein; KEGG: ana:asr4653 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
     0.514
ACK72047.1
KEGG: amr:AM1_2176 hypothetical protein.
  
     0.508
ACK73108.1
PFAM: metallophosphoesterase; KEGG: gvi:glr2510 hypothetical protein.
  
     0.505
ACK69002.1
Conserved hypothetical protein; KEGG: ana:all3191 unknown protein.
  
     0.474
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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