STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71759.1PFAM: WD-40 repeat protein; KEGG: ava:Ava_2499 WD-40 repeat-containing protein. (826 aa)    
Predicted Functional Partners:
ACK71758.1
KEGG: ava:Ava_5066 hypothetical protein.
 
     0.808
ACK71754.1
KEGG: ava:Ava_5062 hypothetical protein.
 
     0.739
ACK71756.1
KEGG: npu:Npun_R0547 hypothetical protein.
 
     0.626
ACK71760.1
KEGG: mar:MAE_23190 hypothetical protein.
 
     0.611
ACK71755.1
Conserved hypothetical protein; KEGG: ana:all2003 unknown protein.
 
     0.577
ACK73086.1
PFAM: tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: mar:MAE_30600 serine/threonine protein kinase.
 
 
  0.561
ACK69623.1
PFAM: phospholipid/glycerol acyltransferase; KEGG: ana:all0850 putative acyltransferase.
  
     0.541
ACK71757.1
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: npu:Npun_R0548 heavy metal translocating P-type ATPase.
 
     0.530
ACK70880.1
KEGG: npu:Npun_F4259 hypothetical protein.
  
     0.528
ACK72275.1
KEGG: ava:Ava_C0038 hypothetical protein.
  
     0.527
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.