STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71770.1PFAM: acriflavin resistance protein; KEGG: mar:MAE_07150 cation or drug efflux system protein. (900 aa)    
Predicted Functional Partners:
ACK71771.1
KEGG: mar:MAE_48310 hypothetical protein.
       0.762
ACK69231.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: syn:sll0141 putative HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.752
ACK71888.1
PFAM: outer membrane efflux protein; KEGG: mar:MAE_14730 outer membrane efflux protein.
 
 
 0.736
ACK69404.1
KEGG: syn:slr0793 Cation efflux system protein involved in nickel and cobalt tolerance.
  
 
 0.611
ACK73251.1
KEGG: syp:SYNPCC7002_E0022 hypothetical protein.
  
 
 0.583
ACK71769.1
KEGG: npu:Npun_F5465 hypothetical protein.
       0.473
ACK72149.1
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ana:alr1121 two-component hybrid sensor and regulator.
 
 
 
 0.420
ACK69724.1
KEGG: npu:Npun_R5283 hypothetical protein.
  
     0.405
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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