STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK71892.1PFAM: UspA domain protein; KEGG: mar:MAE_48380 universal stress protein. (283 aa)    
Predicted Functional Partners:
ACK69120.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: npu:Npun_F5295 heat domain-containing protein.
  
     0.735
ACK68626.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ter:Tery_5047 heat repeat-containing PBS lyase.
  
     0.705
ACK68629.1
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: mar:MAE_24470 phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.691
ACK71046.1
PFAM: Phycobilisome linker polypeptide; Phycobilisome protein; KEGG: mar:MAE_49370 phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.689
ACK68628.1
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: mar:MAE_24480 phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.671
ACK73386.1
PFAM: OstA family protein; KEGG: mar:MAE_51220 hypothetical protein.
 
   
 0.656
ACK70399.1
PFAM: Phycobilisome protein; KEGG: mar:MAE_46230 allophycocyanin-B.
  
     0.652
ACK71050.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
     0.647
ACK72131.1
PFAM: OstA family protein; KEGG: mar:MAE_51270 OstA-like protein precursor.
  
     0.630
ACK71048.1
PFAM: Phycobilisome protein; KEGG: mar:MAE_10270 allophycocyanin alpha subunit.
  
     0.627
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.