STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72065.1TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: mar:MAE_61640 putative hydrogenase expression/formation protein. (780 aa)    
Predicted Functional Partners:
ACK72067.1
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: syn:sll1462 putative hydrogenase expression/formation protein HypE.
 
 
 0.991
ACK72064.1
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: syp:SYNPCC7002_A0205 hydrogenase assembly chaperone HypC/HupF.
 
 
 0.977
ACK69711.1
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: syp:SYNPCC7002_A0206 hydrogenase expression/formation protein HypD.
 
  
 0.901
ACK70242.1
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: ava:Ava_B0171 hydrogenase accessory protein HypB.
 
   
 0.840
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.818
ACK73595.1
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: mar:MAE_18870 putative hydrogenase expression/formation protein.
 
   
 0.777
ACK70250.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: ava:Ava_4595 nickel-dependent hydrogenase, large subunit.
 
 
 
 0.768
ACK70249.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ter:Tery_3369 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
 
 0.724
ACK72530.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: mar:MAE_14210 bidirectional hydrogenase hydrogenase subunit.
 
   
 0.711
ACK72533.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: mar:MAE_57940 hydrogenase subunit of the bidirectional hydrogenase.
 
  
 0.583
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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