STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72210.1PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: cti:RALTA_B1421 conserved hypothetical protein; putative exported protein; DUF1254, 1214. (445 aa)    
Predicted Functional Partners:
ACK72213.1
PFAM: sulfatase; KEGG: mac:MA2645 arylsulfatase.
 
     0.802
ACK69653.1
KEGG: fjo:Fjoh_1143 hypothetical protein.
 
     0.732
ACK69652.1
PFAM: sulfatase; KEGG: mac:MA2648 arylsulfatase.
 
     0.698
ACK72211.1
KEGG: mar:MAE_46330 hypothetical protein.
 
     0.610
ACK72209.1
Chromosome segregation ATPase-like protein; KEGG: syn:slr1567 hypothetical protein.
 
     0.572
ACK69391.1
PFAM: Carotenoid oxygenase; KEGG: npu:Npun_F2869 carotenoid oxygenase.
  
     0.534
ACK72207.1
PFAM: MscS Mechanosensitive ion channel; KEGG: mar:MAE_44000 mechanosensitive ion channel homolog.
 
     0.502
ACK72215.1
KEGG: amr:AM1_0163 hypothetical protein.
 
     0.467
ACK69420.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: npu:Npun_R1926 Rieske (2Fe-2S) domain-containing protein.
  
     0.440
ACK69654.1
PFAM: protein of unknown function DUF323; KEGG: npu:Npun_F2391 hypothetical protein.
 
     0.439
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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