STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72211.1KEGG: mar:MAE_46330 hypothetical protein. (168 aa)    
Predicted Functional Partners:
ACK72221.1
KEGG: syn:slr1774 hypothetical protein.
 
     0.740
ACK72206.1
PFAM: protein of unknown function DUF1400; KEGG: mar:MAE_43980 hypothetical protein.
 
     0.702
ACK72215.1
KEGG: amr:AM1_0163 hypothetical protein.
 
     0.697
ACK72212.1
KEGG: mar:MAE_27590 hypothetical protein.
       0.686
ACK72209.1
Chromosome segregation ATPase-like protein; KEGG: syn:slr1567 hypothetical protein.
 
     0.678
ACK72208.1
PFAM: extracellular solute-binding protein family 1; KEGG: mar:MAE_44010 hypothetical protein.
 
     0.659
ACK72220.1
KEGG: mca:MCA0408 hypothetical protein.
 
     0.637
ACK69130.1
KEGG: mar:MAE_34030 hypothetical protein.
  
     0.634
ACK70931.1
KEGG: mar:MAE_34470 hypothetical protein.
  
     0.619
ACK72210.1
PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: cti:RALTA_B1421 conserved hypothetical protein; putative exported protein; DUF1254, 1214.
 
     0.610
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.